Can't help too much with places to stay. My group will be on a cruise. One of our ports is Juneau. Here's the link to the Juneau Convention and Visitor's Bureau. I was in touch with a woman by the name of Terry Miller and she was very helpful. I'd also check with the CVB in Skagway as well. I can tell you that there's a bar in Juneau called the Red Dog Saloon that I'll be visiting -- if you're so inclined, I think you'll enjoy it.
http://www.traveljuneau.com/index.php